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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6067673_6072520_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6067673 - 6072520

Intron Length:

4848

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCGAGGCGA

5'SS Class:

major

3'SS Sequence:

CTAGCCAGGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGGAA

U12 Branch Point Sequence:

AGCTGTGGAACT

Flanking Amino Acid:

DRGPLRLLAFSFPTTLKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

57.6

39.4

Major BPS

48.8

-0

1.5

49.1

46.3

Major PPT

42.2

-0.4

1.7

38.8

38.7

Minor 5ss

14.5

-4.1

3.4

17.5

31.6

Minor BPS

41.7

-0.5

2.3

59.39

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022827

6067649 - 6073483

5835