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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6086640_6089816_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6086640 - 6089816

Intron Length:

3177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACAGGG

5'SS Class:

major

3'SS Sequence:

TGGTGCCGGGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

TCCGCCGTACCC

Flanking Amino Acid:

RYRLYPRYKCRNSPVCRASR

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.2

56.8

42.6

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

43.6

-0.3

1.7

43.3

Minor 5ss

29.9

-2.3

3.3

38.5

46.6

Minor BPS

45.2

-0.3

2.3

57.24

47.8

Associated Gene:

Gene:

PLA2G2D

Ensembl Gene ID:

ENSAPLG00000024116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027432

6082981 - 6089847

6867