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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6092630_6093167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6092630 - 6093167

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

TAACCTCCAACT

Flanking Amino Acid:

YSIQGSQIVCGGGSTCQTTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

64.6

40.3

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

78.5

0.64

0.7

70.1

30.8

Minor 5ss

31.3

-2.1

3.4

42.6

44.5

Minor BPS

48.8

-0

1.9

69.2

40.9

Associated Gene:

Gene:

PLA2G2E

Ensembl Gene ID:

ENSAPLG00000006393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006621

6092043 - 6093310

1268