Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_6098027_6098815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6098027 - 6098815

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAC

U12 Branch Point Sequence:

TGTCTGAGAAAA

Flanking Amino Acid:

ILQVKEMEGIGAEEQRDPQS

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

47.7

-0.1

51.4

28.5

Major PPT

0.4

65.2

41.1

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

38.8

-0.8

2.2

52.84

38.3

Associated Gene:

Gene:

OTUD3

Ensembl Gene ID:

ENSAPLG00000006113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006339

6095928 - 6104248

8321