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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6116892_6117123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6116892 - 6117123

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGAAGT

5'SS Class:

major

3'SS Sequence:

TCTGAACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCTCTGAACT

Flanking Amino Acid:

CTLKRTSPFCVEMAAEEKWK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

64.5

41.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.2

0.55

0.9

66.4

39.4

Minor 5ss

31.7

-2.1

3.1

41.4

44.7

Minor BPS

67.9

0.64

1.5

82.07

39.1

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033238

6116046 - 6155220

39175

ENSAPLT00000005989

6116046 - 6155282

39237