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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6117309_6117925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6117309 - 6117925

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTACAT

5'SS Class:

major

3'SS Sequence:

TGTTGCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

AGGGCCTTAACC

Flanking Amino Acid:

LAGLFPEEEQSSFRTEFIDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

64.6

41.2

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

80.5

0.69

0.9

37.5

Minor 5ss

32.6

-2

3.4

48.1

47.4

Minor BPS

69.1

0.58

1.4

69.55

41.8

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033238

6116046 - 6155220

39175

ENSAPLT00000031157

6114007 - 6156749

42743

ENSAPLT00000005989

6116046 - 6155282

39237