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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6131842_6132342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6131842 - 6132342

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTGCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

ATTTCTGAGATT

Flanking Amino Acid:

LFGAAGAGLTGYKMKKRVGA

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

0.9

67.8

37.5

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

68.9

0.43

65.4

Minor 5ss

29.9

-2.3

3.3

35.1

42.4

Minor BPS

47.1

-0.1

2.3

72.25

39.7

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033238

6116046 - 6155220

39175

ENSAPLT00000031157

6114007 - 6156749

42743

ENSAPLT00000005989

6116046 - 6155282

39237