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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6132199_6132342_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

6132199 - 6132342

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCATGCGT

5'SS Class:

weak_major

3'SS Sequence:

TTGTTGTGCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

ATTTCTGAGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.8

0.07

1.4

50.9

45.6

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

68.9

0.43

65.4

Minor 5ss

29.7

-2.3

3.3

39.8

39.9

Minor BPS

47.1

-0.1

2.3

72.25

39.7

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043469

6132114 - 6154546

22433