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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6154377_6154605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6154377 - 6154605

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGACTC

5'SS Class:

major

3'SS Sequence:

TCTCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGACAT

U12 Branch Point Sequence:

ATCTCTTTCTCT

Flanking Amino Acid:

PAKKSQQEAGDRIPSPSSAP

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

66.3

39.5

Major BPS

-0

1.2

56.4

39.5

Major PPT

0.61

0.8

68.8

37.2

Minor 5ss

31.6

-2.1

3.2

43.6

Minor BPS

43.2

-0.4

3.6

73.56

43.9

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033238

6116046 - 6155220

39175

ENSAPLT00000031157

6114007 - 6156749

42743