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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6154739_6155103_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6154739 - 6155103

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTCC

5'SS Class:

major

3'SS Sequence:

TTTTGGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTGATTTGGATT

Flanking Amino Acid:

TTRGCCVLSTRCAAGSGCPA

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

62.8

38.8

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

85.5

0.8

0.9

76.9

42.1

Minor 5ss

38.3

-1.3

3.2

50.4

46.4

Minor BPS

49.3

0.03

1.4

67.17

38.3

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033238

6116046 - 6155220

39175

ENSAPLT00000031157

6114007 - 6156749

42743