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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6155221_6155768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

6155221 - 6155768

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCTGC

5'SS Class:

major

3'SS Sequence:

TGTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CCTTCTGAGAGC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

57.9

42.1

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

84.3

0.77

0.8

77.4

36.9

Minor 5ss

46.6

-0.3

2.5

44.6

Minor BPS

38.9

-0.8

2.4

48.02

43.1

Associated Gene:

Gene:

TMCO4

Ensembl Gene ID:

ENSAPLG00000005788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031157

6114007 - 6156749

42743