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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6177071_6180042_R

Intron Information:

Intron Rank:

151173

Intron Class:

major

Intron Phase:

Intron Coordinates:

6177071 - 6180042

Intron Length:

2972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CGATTTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

CGATTTTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

73.6

0.53

69.2

40.5

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

67.6

0.55

1.2

68.16

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020829

6176516 - 6180917

4402