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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6289241_6289616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6289241 - 6289616

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

ATTTCCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AAATGAATAACC

Flanking Amino Acid:

ENGSLDAFLRKHDGQFTIIQ

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

58.1

42.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

83.2

0.75

0.8

74.4

35.8

Minor 5ss

-1.6

3.3

41.1

45.6

Minor BPS

44.9

-0.4

2.2

57.66

Associated Gene:

Gene:

EPHA8

Ensembl Gene ID:

ENSAPLG00000003107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027177

6250908 - 6293987

43080

ENSAPLT00000003273

6250908 - 6293987

43080

ENSAPLT00000041810

6272094 - 6293987

21894