Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_6289827_6290921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6289827 - 6290921

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGCGTGGC

5'SS Class:

major

3'SS Sequence:

CTTGCCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

ATGAAAATAACA

Flanking Amino Acid:

DDPDAAYTTTGGKIPIRWTA

Intron Amino Acid Position:

782

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

58.1

41.5

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

75.9

0.58

0.9

68.9

Minor 5ss

-2.6

3.2

34.5

41.9

Minor BPS

44.8

-0.4

58.4

40.2

Associated Gene:

Gene:

EPHA8

Ensembl Gene ID:

ENSAPLG00000003107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027177

6250908 - 6293987

43080

ENSAPLT00000003273

6250908 - 6293987

43080

ENSAPLT00000041810

6272094 - 6293987

21894