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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6331428_6331662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6331428 - 6331662

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CACCTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCCTCCCCACCT

Flanking Amino Acid:

DGLKGAKGEPGIPAIPATRG

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

52.1

0.05

1.3

41.8

Major PPT

70.9

0.47

0.8

64.2

30.7

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

44.2

-0.3

2.1

60.29

48.9

Associated Gene:

Gene:

C1QC

Ensembl Gene ID:

ENSAPLG00000029863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033290

6330156 - 6332698

2543