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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6334468_6335272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6334468 - 6335272

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAT

U12 Branch Point Sequence:

AGCACCTCAGCA

Flanking Amino Acid:

ASCLEPAPSCREDKMQTMWV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

50.7

0.02

1.5

44.2

Major PPT

68.9

0.43

63.6

38.1

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

47.5

-0.1

1.8

56.08

42.5

Associated Gene:

Gene:

C1QB

Ensembl Gene ID:

ENSAPLG00000002995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003024

6334307 - 6336409

2103