Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_6437924_6438544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6437924 - 6438544

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTAGG

5'SS Class:

major

3'SS Sequence:

GTTCCCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GTTCCCTTCACA

Flanking Amino Acid:

DADPVDMPCTTIPSAPQAVI

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.1

59.4

45.1

Major BPS

72.7

0.56

30.1

Major PPT

78.4

0.64

0.8

72.1

32.6

Minor 5ss

43.4

-0.7

2.5

56.2

42.3

Minor BPS

68.2

0.57

1.8

77.93

38.4

Associated Gene:

Gene:

EPHB2

Ensembl Gene ID:

ENSAPLG00000015180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015943

6394628 - 6473026

78399