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Intron Name: Anas_platyrhynchos_platyrhynchos_22_644191_645688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

644191 - 645688

Intron Length:

1498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCATTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CAGTCACTAATG

Flanking Amino Acid:

RPSRKNEKAKISIDSIQEVC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.65

0.9

71.1

39.6

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

46.4

-0.4

50.4

43.7

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896