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Intron Name: Anas_platyrhynchos_platyrhynchos_22_645933_646486_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

645933 - 646486

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

AT-AT

5'SS Sequence:

CCA|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACTCCTGTTCAAT|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

TGGTCCTTAACT

Flanking Amino Acid:

SLAKRQRTRDQWLKQTFDEA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-1.1

3.3

47.3

43.8

Major BPS

69.7

0.49

59.9

38.5

Major PPT

37.5

-0.7

3.2

52.1

41.3

Minor 5ss

1.6

0.7

93.5

17.1

Minor BPS

87.3

1.25

93.02

35.3

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009364

616883 - 675778

58896

ENSAPLT00000024566

608633 - 677192

68560