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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6461264_6461383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6461264 - 6461383

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAATTAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGGAA

U12 Branch Point Sequence:

TGCTTAGGAATG

Flanking Amino Acid:

LTSASGLGTQRRRGFERADS

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

76.4

38.8

Major BPS

50.5

0.01

1.4

51.7

43.9

Major PPT

87.9

0.85

0.7

80.1

31.9

Minor 5ss

24.8

-2.9

3.5

34.2

41.1

Minor BPS

39.9

-0.9

2.2

45.38

41.3

Associated Gene:

Gene:

EPHB2

Ensembl Gene ID:

ENSAPLG00000015180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015943

6394628 - 6473026

78399