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Intron Name: Anas_platyrhynchos_platyrhynchos_22_646617_649884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

646617 - 649884

Intron Length:

3268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CATTGCTGTATT

Flanking Amino Acid:

PRQKVKQMFKEADTDDNQGM

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

67.9

0.4

1.1

61.7

43.7

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

-0.2

2.2

65.53

45.3

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896