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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6467406_6470437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6467406 - 6470437

Intron Length:

3032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CTGTATTGATCT

Flanking Amino Acid:

RPYWDMTNQDVINAIEQDYR

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

76.5

27.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

80.1

0.68

0.8

75.1

33.3

Minor 5ss

37.5

-1.4

2.9

41.4

Minor BPS

-0.1

1.9

65.35

45.2

Associated Gene:

Gene:

EPHB2

Ensembl Gene ID:

ENSAPLG00000015180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015943

6394628 - 6473026

78399