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Intron Name: Anas_platyrhynchos_platyrhynchos_22_650056_652118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

650056 - 652118

Intron Length:

2063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCCTG

5'SS Class:

major

3'SS Sequence:

GCTACTTCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

TACTAGTTAACA

Flanking Amino Acid:

LRRFLENEQKMTNVTKEQCL

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

75.9

0.58

0.9

68.5

37.3

Minor 5ss

40.1

-1.1

3.4

55.3

48.9

Minor BPS

54.3

0.13

2.2

69.49

42.6

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896