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Intron Name: Anas_platyrhynchos_platyrhynchos_22_653484_654359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

653484 - 654359

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTATGTATA

5'SS Class:

major

3'SS Sequence:

ATATCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

ACTTGCTTATAT

Flanking Amino Acid:

TINKYAFIKNEYPVILSIEN

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

73.4

37.3

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

69.6

0.44

62.7

43.4

Minor 5ss

46.7

-0.3

2.5

42.5

Minor BPS

49.8

0.07

2.1

71.39

45.3

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896