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Intron Name: Anas_platyrhynchos_platyrhynchos_22_654932_655696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

654932 - 655696

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTCG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

CTTTGATTAACA

Flanking Amino Acid:

DDDCKLMNGDASTNRKRVEN

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.4

36.7

Major BPS

0.85

0.9

39.9

Major PPT

81.2

0.7

0.9

73.5

41.9

Minor 5ss

42.9

-0.8

2.7

55.4

41.9

Minor BPS

61.3

0.35

2.1

76.36

40.9

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009364

616883 - 675778

58896

ENSAPLT00000024566

608633 - 677192

68560