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Intron Name: Anas_platyrhynchos_platyrhynchos_22_658317_659059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

658317 - 659059

Intron Length:

743

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTAC

5'SS Class:

major

3'SS Sequence:

TTTATCGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTGCTTTATCG

Flanking Amino Acid:

NVARGSVHCTRINRQKKTMK

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

72.2

33.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.9

0.63

0.9

70.1

41.2

Minor 5ss

42.9

-0.8

2.4

52.8

44.4

Minor BPS

62.8

0.26

1.8

70.73

42.9

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896