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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6596150_6609804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6596150 - 6609804

Intron Length:

13655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCCAATCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

TTTTCTCCAATC

Flanking Amino Acid:

EKNLSDLIDLVPSLCEDLLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

0.4

1.1

57.8

38.6

Major PPT

65.7

0.35

63.1

37.9

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

58.4

0.24

1.8

75.28

35.3

Associated Gene:

Gene:

CAPZB

Ensembl Gene ID:

ENSAPLG00000014614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022911

6596024 - 6639910

43887

ENSAPLT00000015257

6596024 - 6641907

45884