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Intron Name: Anas_platyrhynchos_platyrhynchos_22_662112_662610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

662112 - 662610

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AATTCTTTCATT

Flanking Amino Acid:

KEQTRVVDDNGFNPMWEETL

Intron Amino Acid Position:

784

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

77.1

0.61

0.8

69.9

35.5

Minor 5ss

38.4

-1.3

45.7

43.4

Minor BPS

63.9

0.52

1.7

79.18

37.3

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896