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Intron Name: Anas_platyrhynchos_platyrhynchos_22_662758_662895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

662758 - 662895

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

CACTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTGCTCACTC

Flanking Amino Acid:

RTIAFSSMMPGYRHVYLEGI

Intron Amino Acid Position:

833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

75.8

0.58

0.9

72.3

37.4

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

46.6

-0.2

2.2

61.86

44.3

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896