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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6628865_6636774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6628865 - 6636774

Intron Length:

7910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAACAA

U12 Branch Point Sequence:

AAGAGCGTACCA

Flanking Amino Acid:

MNLGGSLTRQMEKDETVSDS

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

48.7

-0

1.2

55.4

40.4

Major PPT

87.5

0.84

0.6

81.1

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

38.4

-0.8

2.4

47.24

42.7

Associated Gene:

Gene:

CAPZB

Ensembl Gene ID:

ENSAPLG00000014614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022911

6596024 - 6639910

43887

ENSAPLT00000015257

6596024 - 6641907

45884