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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6636841_6638441_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6636841 - 6638441

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

GCTGCAATGACT

Flanking Amino Acid:

HIANIGRLVEDMENKIRSTL

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

87.2

0.84

0.6

81.3

30.8

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

-0.1

66.22

44.2

Associated Gene:

Gene:

CAPZB

Ensembl Gene ID:

ENSAPLG00000014614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022911

6596024 - 6639910

43887

ENSAPLT00000015257

6596024 - 6641907

45884