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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6646938_6647321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6646938 - 6647321

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCGAG

5'SS Class:

major

3'SS Sequence:

CCTCTCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

CTCTCCCCATCC

Flanking Amino Acid:

CSRLPQIYTNYQRKSTAGVS

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

65.3

40.8

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

81.7

0.71

0.7

72.7

32.1

Minor 5ss

38.1

-1.3

3.4

45.9

Minor BPS

45.6

-0.3

2.1

59.12

45.7

Associated Gene:

Gene:

SLC66A1

Ensembl Gene ID:

ENSAPLG00000014448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015055

6646332 - 6649467

3136