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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6647655_6648849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6647655 - 6648849

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

CCCGCCCTAAAT

Flanking Amino Acid:

YYKAKNQGRGFVAPINVACL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

24.8

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

79.9

0.67

0.8

73.7

31.3

Minor 5ss

43.1

-0.8

3.1

62.8

Minor BPS

47.6

-0.1

1.9

61.25

48.1

Associated Gene:

Gene:

SLC66A1

Ensembl Gene ID:

ENSAPLG00000014448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015055

6646332 - 6649467

3136