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Intron Name: Anas_platyrhynchos_platyrhynchos_22_669248_674048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

669248 - 674048

Intron Length:

4801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATGTCTCCAATT

Flanking Amino Acid:

SGEVHGKGLKDVCHFSMQRS

Intron Amino Acid Position:

972

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

64.9

0.34

64.5

36.8

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

50.3

0.09

1.8

71.2

40.2

Associated Gene:

Gene:

PLCH2

Ensembl Gene ID:

ENSAPLG00000008995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024566

608633 - 677192

68560

ENSAPLT00000009364

616883 - 675778

58896