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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6728622_6729239_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6728622 - 6729239

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATATTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

78.6

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.4

0.46

0.9

36.4

Minor 5ss

35.7

-1.6

3.4

48.7

47.5

Minor BPS

57.2

0.09

1.4

56.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012507

6726010 - 6749392

23383