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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6733399_6735532_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6733399 - 6735532

Intron Length:

2134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTATT

5'SS Class:

weak_major

3'SS Sequence:

TCCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

GCATAGTTAATA

Flanking Amino Acid:

YKKVWCPTNEGEPMRIIYRM

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

83.5

35.1

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

88.4

0.86

0.7

83.9

24.2

Minor 5ss

61.6

0.39

2.1

77.4

37.4

Minor BPS

47.6

-0.1

2.2

57.78

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012507

6726010 - 6749392

23383