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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6738425_6738947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6738425 - 6738947

Intron Length:

523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTGTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

TGCCCTTCAGCT

Flanking Amino Acid:

YMKKHIPSAKNLDADIWKKF

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.1

31.5

Major BPS

51.1

0.03

1.6

43.2

Major PPT

81.6

0.71

0.9

77.1

37.1

Minor 5ss

36.7

-1.5

3.5

39.9

Minor BPS

48.7

-0

1.8

66.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012507

6726010 - 6749392

23383