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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6748641_6749327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6748641 - 6749327

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TTTTGTTTAAAG

Flanking Amino Acid:

ETFSEFLDVAGLLSEISDPD

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

80.5

34.9

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

77.2

0.61

77.9

34.4

Minor 5ss

49.9

-0

2.8

70.4

41.2

Minor BPS

62.6

0.26

1.9

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012507

6726010 - 6749392

23383