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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6838605_6842307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6838605 - 6842307

Intron Length:

3703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCACTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCTCCCCCACTT

Flanking Amino Acid:

AGYQYGQYGQTAVDYLAKNV

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

73.8

0.54

0.8

29.2

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

42.2

-0.5

58.01

45.1

Associated Gene:

Gene:

PAX7

Ensembl Gene ID:

ENSAPLG00000005016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042928

6837489 - 6943109

105621

ENSAPLT00000005247

6837489 - 6943109

105621