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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6842555_6877562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6842555 - 6877562

Intron Length:

35008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

TCCTCTGGATGA

Flanking Amino Acid:

NPVSNGLSPQVMSILSNPSG

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

0.72

0.9

73.6

41.8

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

37.4

-0.9

2.3

46.84

43.7

Associated Gene:

Gene:

PAX7

Ensembl Gene ID:

ENSAPLG00000005016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042928

6837489 - 6943109

105621

ENSAPLT00000005247

6837489 - 6943109

105621