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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6878543_6891259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6878543 - 6891259

Intron Length:

12717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAACG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTGTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TCACACGTACTT

Flanking Amino Acid:

RTKLTEARVQVWFSNRRARW

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.1

36.3

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

71.4

0.48

0.9

68.2

37.4

Minor 5ss

33.8

-1.8

2.9

41.1

44.9

Minor BPS

41.6

-0.5

2.2

58.85

44.4

Associated Gene:

Gene:

PAX7

Ensembl Gene ID:

ENSAPLG00000005016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042928

6837489 - 6943109

105621

ENSAPLT00000005247

6837489 - 6943109

105621