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Intron Name: Anas_platyrhynchos_platyrhynchos_22_6940961_6942883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6940961 - 6942883

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCGCGCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

NYPRTGFPLEVSTPLGQGRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.6

0.49

0.9

61.6

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

PAX7

Ensembl Gene ID:

ENSAPLG00000005016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042928

6837489 - 6943109

105621

ENSAPLT00000005247

6837489 - 6943109

105621