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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_6969480_6969843_R

Intron Information:

Intron Rank:
144406
Intron Class:
major
Intron Phase:
Intron Coordinates:
6969480 - 6969843
Intron Length:
364

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTCGGTGTC
5'SS Class:
major
3'SS Sequence:
CACCTCCTCTTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTTTCAC
U12 Branch Point Sequence:
TTCCCTTTCACC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.1
0.52
1.3
74.2
36
Major BPS
77.7
0.69
1
81
30.2
Major PPT
68.2
0.41
0.8
65.5
30
Minor 5ss
31.3
-2.1
3.4
43.4
44.3
Minor BPS
60.9
0.32
1.8
71.37
40.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024974
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000020449
6969101 - 6970496
1396