Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_706541_708295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

706541 - 708295

Intron Length:

1755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGAG

5'SS Class:

major

3'SS Sequence:

TTCTCATCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTCCCAAAAAC

Flanking Amino Acid:

GLGALLTKTKKFDELLQLAS

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

58.6

40.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.6

0.67

0.8

77.6

Minor 5ss

41.4

-1

3.3

55.2

Minor BPS

47.5

-0.2

63.43

41.2

Associated Gene:

Gene:

PANK4

Ensembl Gene ID:

ENSAPLG00000008017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029018

691942 - 714768

22827

ENSAPLT00000023110

691502 - 714768

23267

ENSAPLT00000008369

691014 - 714768

23755