Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_711315_712069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

711315 - 712069

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

RVRSFDHSGKDIENEPLYEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

74.6

0.61

1.4

34.5

Major PPT

80.4

0.68

81.8

27.5

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

PANK4

Ensembl Gene ID:

ENSAPLG00000008017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029018

691942 - 714768

22827

ENSAPLT00000023110

691502 - 714768

23267

ENSAPLT00000008369

691014 - 714768

23755