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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7189327_7189969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7189327 - 7189969

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTCAGAGAG

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GTATTGTTAACC

Flanking Amino Acid:

SWALQEEGGKDAQEFSKLFM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

59.7

39.7

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

80.3

0.68

0.8

73.1

37.3

Minor 5ss

26.9

-2.7

3.1

30.5

36.5

Minor BPS

60.2

0.3

2.1

71.59

39.4

Associated Gene:

Gene:

USP48

Ensembl Gene ID:

ENSAPLG00000003841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004022

7189023 - 7217138

28116