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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7204765_7207733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7204765 - 7207733

Intron Length:

2969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTCAA

U12 Branch Point Sequence:

CTTCTCTTGGCT

Flanking Amino Acid:

NFNEDIVCPHGDLCISENER

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

54.3

0.11

1.2

57.3

39.4

Major PPT

80.7

0.69

0.9

76.3

32.2

Minor 5ss

38.9

-1.2

50.6

40.1

Minor BPS

45.3

-0.2

3.5

75.88

41.2

Associated Gene:

Gene:

USP48

Ensembl Gene ID:

ENSAPLG00000003841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004022

7189023 - 7217138

28116