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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7211970_7214525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7211970 - 7214525

Intron Length:

2556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGATC

5'SS Class:

strong_major

3'SS Sequence:

TTTATGACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTATGACT

Flanking Amino Acid:

YIHKVVDNKKVMKDAAPELN

Intron Amino Acid Position:

794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

77.1

38.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.4

0.64

0.9

74.9

39.7

Minor 5ss

35.8

-1.6

3.5

51.2

45.6

Minor BPS

62.4

0.47

1.6

81.65

33.3

Associated Gene:

Gene:

USP48

Ensembl Gene ID:

ENSAPLG00000003841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004022

7189023 - 7217138

28116