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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7215603_7215824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7215603 - 7215824

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTGGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TCTGCACAAAAT

Flanking Amino Acid:

NQTLKELKIQIMHAFSVAPF

Intron Amino Acid Position:

881

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

73.4

43.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

66.3

0.37

1.1

60.4

44.9

Minor 5ss

32.5

-2

3.4

47.7

47.8

Minor BPS

41.5

-0.5

2.2

62.91

46.6

Associated Gene:

Gene:

USP48

Ensembl Gene ID:

ENSAPLG00000003841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004022

7189023 - 7217138

28116