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Intron Name: Anas_platyrhynchos_platyrhynchos_22_7247828_7248064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7247828 - 7248064

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

CTTGTCACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TCCTTGTCACCA

Flanking Amino Acid:

DQLRKPPNRDQWSMTPPTVN

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

69.4

41.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

72.7

0.51

0.9

65.8

34.7

Minor 5ss

39.1

-1.2

57.4

40.4

Minor BPS

42.2

-0.6

2.3

54.1

45.1

Associated Gene:

Gene:

ECE1

Ensembl Gene ID:

ENSAPLG00000004527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021168

7239289 - 7250920

11632

ENSAPLT00000017852

7239289 - 7250920

11632

ENSAPLT00000004703

7240471 - 7250920

10450